GGenomics UI
Examples/Structure prediction

Structure prediction

Pairs the 3D structure and its pLDDT strip against the PAE matrix inside one LinkedSelectionProvider, so a residue picked in either lights up in the other. Drop in a prediction and get the canonical review view.

structure-viewer
pae-matrix
coordinate-link
Structure prediction
model confidence + predicted aligned error
mean pLDDT 80.0
81% confident
Loading structure…
pLDDTVery highConfidentLowVery low
Use arrow keys to move along the sequence, Shift plus arrow to jump ten, Home and End for the ends, Enter to select, Space to add to the selection, Escape to clear.
030 Å
279×279 predicted aligned error
Use arrow keys to move along the sequence, Shift plus arrow to jump ten, Home and End for the ends, Enter to select, Space to add to the selection, Escape to clear.
Source: components/blocks/structure-prediction-block.tsx