Quality Strip

Per-cycle read quality, the FastQC panel.

Preview

About

The first plot anyone should look at and the one most often missing from a custom pipeline UI. Spurious variants at read ends, unmappable tails, and an inflated error rate in one sample all show up here first, and the shape of the decline says what to do: a gentle 3' slope means trim, a mid-read collapse means the run is suspect. Box-and-whisker per cycle over the traffic-light bands this audience already reads fluently, with quantiles rather than mean ± SD — quality distributions are skewed and often bimodal, and a symmetric summary hides the tail that matters.

Usage

import { QualityStrip } from "@/components/ui/quality-strip"

<QualityStrip qualityLines={fastqQualityLines} />