UpSet Plot

Set intersections past the point Venn diagrams break.

Preview

About

Comparing gene or variant lists is routine — three callers, four cohorts, six conditions — and the Venn diagram everyone reaches for stops working at four sets. UpSet separates the two questions: a bar chart for how big each intersection is, a dot matrix for which sets it is, both scaling linearly instead of combinatorially. Bars are exclusive by default so they sum to the union and 'unique to one caller' is directly readable. Clicking a bar broadcasts its members on the entity channel, so the genes behind an intersection light up in a linked heatmap rather than being a number you then go and look up.

Usage

import { UpsetPlot } from "@/components/ui/upset-plot"

<UpsetPlot
  sets={[{ name: "GATK", items: gatkGenes }, { name: "DeepVariant", items: dvGenes }]}
/>